BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A04SP1|AL428823
(591 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1169 0.0
>3x_Contig1619
Length = 7770
Score = 1169 bits (589), Expect = 0.0
Identities = 590/591 (99%)
Strand = Plus / Plus
Query: 1 ggacttgaacctatatacttcgcttatgagacgaatgttttaaccaattaaactatacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5444 ggacttgaacctatatacttcgcttatgagacgaatgttttaaccaattaaactatacaa 5503
Query: 61 gttattatatatttatataatagtataaaattacctaatatttattaagtaatttcccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5504 gttattatatatttatataatagtataaaattacctaatatttattaagtaatttcccgc 5563
Query: 121 ggtcacctcccttcggggggtgccgcgggtagatattaatttatataagccccaaatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5564 ggtcacctcccttcggggggtgccgcgggtagatattaatttatataagccccaaatgca 5623
Query: 181 tcatccctatgaggatgtcgcatttggggcaaagggtgaatactgagaattgaactcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5624 tcatccctatgaggatgtcgcatttggggcaaagggtgaatactgagaattgaactcaga 5683
Query: 241 tttaacgcgccacaagcattctttctacctttgaaatatattcacctataattatatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5684 tttaacgcgccacaagcattctttctacctttgaaatatattcacctataattatatata 5743
Query: 301 aaaatatagaaaaatgaacggaaaatatgagagtcgaactcataagaacatagttcaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5744 aaaatatagaaaaatgaacggaaaatatgagagtcgaactcataagaacatagttcaatt 5803
Query: 361 atgtagcaaataatctaccttaccaatagtgaattttcctattacgaatctaatcagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5804 atgtagcaaataatctaccttaccaatagtgaattttcctattacgaatctaatcagact 5863
Query: 421 tgcactgacatcaaccatcgtgacaagatgggactttactattaagctacagatccatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5864 tgcactgacatcaaccatcgtgacaagatgggactttactattaagctacagatccatta 5923
Query: 481 tataattttactgtgtatccttaaaaaaaaattaagtacaggattatcaaaattaatata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5924 tataattttactgtgtatccttaaaaaaaaattaagtacaggattatcaaaattaatata 5983
Query: 541 acccgccaatttatataatavattggcgggttatatatctatatatatttt 591
|||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5984 acccgccaatttatataataaattggcgggttatatatctatatatatttt 6034
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5847
Number of Sequences: 1807
Number of extensions: 5847
Number of successful extensions: 239
Number of sequences better than 1.0e-20: 1
length of query: 591
length of database: 10,358,551
effective HSP length: 16
effective length of query: 575
effective length of database: 10,329,639
effective search space: 5939542425
effective search space used: 5939542425
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)